Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa02g0972	Pa02g0972`Pa02g0972.1`	…scription cis-regulatory region binding \| response to hypoxia \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat \| heat acclimation \| cellular response to heat \| cellular response to unfolded protein \| response to hydrogen peroxide \| sequence-spe… Show annotation evidence eggNOG Preferred name: HSF30 \| Seed ortholog: 337451.A0A443N564 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@3193\|AWe-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|CFa-30, HSF_DNA-bind@35493\|uY-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0010286 heat acclimation; GO:0034605 cellular response to heat; GO:0034620 cellular response to unfolded protein; GO:0042542 response to hydrogen peroxide; GO:0043565... KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g0983	Pa02g0983`Pa02g0983.1`	…LH_306_353 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0009733 \| GO:1990110 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to auxin \| callus formation Show annotation evidence eggNOG Preferred name: BHLH41 \| Seed ortholog: 337451.A0A443N240 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|CWl-25, HLH@33090\|AAF-17, HLH@3398\|CtC-26, HLH@35493\|Apr-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:1990110 callus formation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g0985	Pa02g0985`Pa02g0985.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: BnaAnng42000D, RGA3 \| Seed ortholog: 337451.A0A3S3M3C7, 337451.A0A3S3PSA5, 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Phosphodiest@131567\|Hm-12, Phosphodiest@3398\|EEs-32, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16, ec:3.1.4.1, ec:3.6.1.9 \| KO: K01513, K19613 \| Pathway: 00230, 00240, 00500, 00740, 00760, 00770, 01100, 01110, 01232, 04016, 04075, 04626 \| BRITE: 00001, 00537, 01000, 04090	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g0993	Pa02g0993`Pa02g0993.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0, 337451.A0A443N271 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g0995	Pa02g0995`Pa02g0995.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3M3C7, 337451.A0A3S3M3G7 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K14497, K16225, K16226, K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g0996	Pa02g0996`Pa02g0996.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A443N271 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1024	Pa02g1024`Pa02g1024.1`	… \| HLH@3398\|JyN-34 \| S \| HLH_154_201 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: BHLH79 \| Seed ortholog: 337451.A0A3S4N4D6 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|DVq-27, HLH@33090\|AbH-19, HLH@3398\|JyN-34 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1085	Pa02g1085`Pa02g1085.1`	…316 \| GO:0048510 \| GO:0055046 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| pollen development \| embryo development ending in seed dormancy \| somatic embryogenesis \| CCAAT-binding fa… Show annotation evidence eggNOG Preferred name: NFYA1 \| Seed ortholog: 337451.A0A443N2D6 \| COG: S \| eggNOG OG: CBFB_NFYA@2759\|A-1, CBFB_NFYA@33090\|AE-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009793 embryo development ending in seed dormancy; GO:0010262 somatic embryogenesis; GO:0016602 CCAAT-binding factor complex; GO:0045892 negative regulation of DNA... KEGG KO: K08064 \| Pathway: 04612, 05017, 05152 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1090	Pa02g1090`Pa02g1090.1`	…O:0003727 \| GO:0005634 \| GO:0005737 \| GO:0006355 \| GO:0061157 \| DNA binding \| DNA-binding transcription factor activity \| RNA binding \| single-stranded RNA binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| mRNA destabilization Show annotation evidence eggNOG Preferred name: LOC104230786 \| Seed ortholog: 337451.A0A3S3NPI8 \| COG: S \| eggNOG OG: Ank@131221\|AHc-21, Ank@131567\|Hf-12, Ank@2759\|Nl-14, Ank@3398\|DBo-27, zf-CCCH_4@131567\|A-1*, zf-CCCH_4@2759\|AB-6 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0003727 single-stranded RNA binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0061157 mRNA destabilization KEGG EC: ec:2.3.2.27 \| KO: K23047 \| Pathway: 03015, 04144, 04213, 04814 \| BRITE: 00001, 01000, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1095	Pa02g1095`Pa02g1095.1`	…832 \| GO:1901348 \| GO:2000652 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| plant-type secondary cell wall biogenesis \| positive regulation of DNA-templated transcription \| defense response to fungus \| positive regulation of secondary cell wall… Show annotation evidence eggNOG Preferred name: LOC104597428 \| Seed ortholog: 337451.A0A3S3LW56 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|LYW-44, Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|Mih-45, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|UPw-51, Myb_DNA-binding@35493\|IIv-41 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0045893 positive regulation of DNA-templated transcription; GO:0050832 defense response to fungus; GO:1901348 positive regulation of secondary cell wall biogenesis; GO:2000652 regulation of secondary cell wall biogenesis KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1101	Pa02g1101`Pa02g1101.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| core promoter sequence-specific DNA binding \| DNA-binding transcription repressor activity, RNA polymerase II-specific \| DNA-binding transcription act… Show annotation evidence eggNOG Preferred name: LOC104590092 \| Seed ortholog: 337451.A0A443N2D5 \| COG: S \| eggNOG OG: zf-C2H2@131567\|HuZ-30, zf-C2H2@2759\|TXj-36 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001046... KEGG KO: K09205, K09208, K09209, K09228, K13943 \| Pathway: 05168 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1102	Pa02g1102`Pa02g1102.1`	Pa02g1102 \| Pa02g1102.1 \| Pa02g1102.2 \| LOC110800011 \| 337451.A0A3S3M3N7 \| zf-C3HC4@131567\|B-2 \| zf-C3HC4@2759\|DT-10 \| zf-C3HC4@3398\|ABo-20 \| S \| ec:2.3.2.27 \| K15687 \| 00001 \| 01000 \| 04121 \| zf-C3HC4_233_290 \| GO:0000209 \| GO:0002862 \| GO:0003682 \| GO... Show annotation evidence eggNOG Preferred name: LOC110800011 \| Seed ortholog: 337451.A0A3S3M3N7 \| COG: S \| eggNOG OG: zf-C3HC4@131567\|B-2, zf-C3HC4@2759\|DT-10, zf-C3HC4@3398\|ABo-20 GO GO:0000209 protein polyubiquitination; GO:0002862 negative regulation of inflammatory response to antigenic stimulus; GO:0003682 chromatin binding; GO:0003723 RNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008270 zinc... KEGG EC: ec:2.3.2.27 \| KO: K15687 \| BRITE: 00001, 01000, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1112	Pa02g1112`Pa02g1112.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription repressor activity \| transcription corepressor binding \| DNA-binding t… Show annotation evidence eggNOG Preferred name: BHLH130 \| Seed ortholog: 337451.A0A3S3MPX6 \| eggNOG OG: HLH@131567\|pI-16, HLH@58023\|Blb-23 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000902 cell morphogenesis; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987 cis-regulatory region... KEGG KO: K06054, K06055, K09087, K09088, K09089, K09090, K09091 \| Pathway: 03460, 04330, 04950, 05165, 05169, 05200, 05224 \| BRITE: 00001, 03000, 03019, 03400	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1120	Pa02g1120`Pa02g1120.1`	…on cis-regulatory region binding \| response to molecule of bacterial origin \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to auxin \| response to salicylic acid \| response to jasmonic acid \| protein homodimerization activity \| sequence-specific DNA binding \| posit… Show annotation evidence eggNOG Preferred name: LOC103705377 \| Seed ortholog: 337451.A0A3S3N4R0 \| COG: S \| eggNOG OG: DOG1@131567\|A-1*, DOG1@2759\|Pn-15, bZIP_1@131567\|B-2, bZIP_1@3398\|Aoo-27, bZIP_1@35493\|AEs-24 GO GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045893... KEGG KO: K14431 \| Pathway: 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1136	Pa02g1136`Pa02g1136.1`	…GO:0016132 \| GO:0042803 \| GO:0043565 \| GO:0045893 \| GO:0051511 \| GO:2000024 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| brassinosteroid mediated signaling pathway \| response to nitrate \| regulation of phosphate transport \| cel… Show annotation evidence eggNOG Preferred name: PHL5 \| Seed ortholog: 337451.A0A3S3MA67 \| COG: S \| eggNOG OG: Myb_CC_LHEQLE@131567\|A-1*, Myb_CC_LHEQLE@1437183\|Ej-15, Myb_CC_LHEQLE@33090\|AO-11, Myb_DNA-binding@131567\|dl-20, Myb_DNA-binding@2759\|pK-22, Myb_DNA-binding@33090\|Ctb-35! GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009742 brassinosteroid mediated signaling pathway; GO:0010167 response to nitrate; GO:0010966 regulation of phosphate transport; GO:0016036 cellular response to phosphate starvation; GO:0016132 brassinosteroid biosynthetic process; GO:0042803 protein... KEGG EC: ec:6.3.4.5 \| KO: K01940 \| Pathway: 00220, 00250, 01100, 01110, 01230 \| Module: M00029, M00844, M00845, M00978 \| BRITE: 00001, 01000, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1167	Pa02g1167`Pa02g1167.1`	…7 \| GO:0010494 \| GO:0010608 \| GO:0019221 \| GO:0043547 \| GO:1902074 \| P-body \| DNA-binding transcription factor activity \| RNA binding \| protein binding \| nucleus \| nucleoplasm \| cytoplasm \| cytosol \| plasma membrane \| regulation of DNA-templated transcription \| translation \| zinc ion binding \| chlor… Show annotation evidence eggNOG Preferred name: LOC110802195 \| Seed ortholog: 337451.A0A443N2J7 \| COG: COG1094 \| eggNOG OG: KH_1@131567\|B-2, KH_1@1437183\|Amg-22, KH_1@2759\|AR-7, zf-CCCH@131567\|Abo-26, zf-CCCH@1437183\|EZs-37, zf-CCCH@3398\|EBn-36, zf-CCCH_2@131567\|r-7, zf-CCCH_2@1437183\|hr-19, zf-CCCH_2@2759\|BM-9, zf-CCCH_2@33090\|Du-11 GO GO:0000932 P-body; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0006412 translation; GO:0008270 zinc ion binding; GO:0009507 chloroplast; GO:0009793 embryo development ending in seed... KEGG EC: ec:2.3.2.27 \| KO: K13210, K14405, K23047, K23048, K27706 \| Pathway: 03015 \| BRITE: 00001, 01000, 03012, 03019, 03041, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1177	Pa02g1177`Pa02g1177.1`	Pa02g1177 \| Pa02g1177.1 \| LOC100827862 \| 337451.A0A3S3MQ13 \| RRN3@2759\|A-1 \| S \| K15216 \| 00001 \| 03021 \| RRN3_21_545 \| GO:0000182 \| GO:0001042 \| GO:0001164 \| GO:0001179 \| GO:0001181 \| GO:0001701 \| GO:0003674 \| GO:0005515 \| GO:0005575 \| GO:0005634 \| GO... Show annotation evidence eggNOG Preferred name: LOC100827862 \| Seed ortholog: 337451.A0A3S3MQ13 \| COG: S \| eggNOG OG: RRN3@2759\|A-1 GO GO:0000182 rDNA binding; GO:0001042 RNA polymerase I core binding; GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding; GO:0001179 RNA polymerase I general transcription initiation factor binding; GO:0001181 RNA polymerase I general transcription initiation factor activity; GO:0001701 in utero embryonic development; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular... KEGG KO: K15216 \| BRITE: 00001, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1179	Pa02g1179`Pa02g1179.1`	… \| PCC@3398\|ByV-35 \| S \| PCC_181_294 \| GO:0003700 \| GO:0005575 \| GO:0005634 \| DNA-binding transcription factor activity \| cellular_component \| nucleus Show annotation evidence eggNOG Preferred name: LOC104606854 \| Seed ortholog: 337451.A0A3S3M5X5 \| COG: S \| eggNOG OG: PCC@131221\|BEL-29, PCC@131567\|A-1, PCC@33090\|Afv-25, PCC@3398\|ByV-35 GO GO:0003700 DNA-binding transcription factor activity; GO:0005575 cellular_component; GO:0005634 nucleus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1193	Pa02g1193`Pa02g1193.1`	…20_397_478 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006355 \| GO:0032991 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| protein-containing complex Show annotation evidence eggNOG Preferred name: LOC104606869 \| Seed ortholog: 337451.A0A3S3PSL5 \| COG: S \| eggNOG OG: ARID@131567\|A-1*, ARID@2759\|b-5, ARID@3193\|Hx-13, HSP20@131567\|bj-16, HSP20@3193\|GHN-30! GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0032991 protein-containing complex KEGG KO: K24690 \| BRITE: 00001, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1215	Pa02g1215`Pa02g1215.1`	…55 \| GO:0045893 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| positive regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: SPL14 \| Seed ortholog: 337451.A0A3S3MFG1 \| COG: S \| eggNOG OG: SBP@131567\|A-1*, SBP@3193\|DI-9, SBP@33090\|m-6 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1262	Pa02g1262`Pa02g1262.1`	…ence-specific DNA binding \| transcription corepressor binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to oxidative stress \| response to cold \| response to water deprivation \| response to wounding \| response to high light intensity \| response t… Show annotation evidence eggNOG Preferred name: LOC109014213 \| Seed ortholog: 337451.A0A443N2Q6 \| COG: S \| eggNOG OG: zf-C2H2_6@131567\|B-2, zf-C2H2_6@1437183\|PA-16 GO GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001222 transcription corepressor binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006979 response to oxidative stress; GO:0009409 response to cold; GO:0009414 response to water...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1274	Pa02g1274`Pa02g1274.1`	Pa02g1274 \| Pa02g1274.1 \| LOC104611639 \| 337451.A0A443N2Q7 \| zf-UBP@2759\|BF-9 \| S \| ec:2.3.2.27 \| ec:3.5.1.98 \| K10632 \| K11407 \| 04613 \| 05014 \| 05034 \| 05203 \| 00001 \| 01000 \| 01009 \| 03019 \| 03036 \| 04121 \| 04131 \| zf-UBP_51_109 \| GO:0000209 \| GO:0001525... Show annotation evidence eggNOG Preferred name: LOC104611639 \| Seed ortholog: 337451.A0A443N2Q7 \| COG: S \| eggNOG OG: zf-UBP@2759\|BF-9 GO GO:0000209 protein polyubiquitination; GO:0001525 angiogenesis; GO:0001932 regulation of protein phosphorylation; GO:0002244 hematopoietic progenitor cell differentiation; GO:0003674 molecular_function; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006476 protein deacetylation; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0006515 protein quality control for misfolded... KEGG EC: ec:2.3.2.27, ec:3.5.1.98 \| KO: K10632, K11407 \| Pathway: 04613, 05014, 05034, 05203 \| BRITE: 00001, 01000, 01009, 03019, 03036, 04121, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1280	Pa02g1280`Pa02g1280.1`	… \| DNA-binding transcription activator activity, RNA polymerase II-specific \| DNA-binding transcription factor activity \| protein binding \| nucleus \| circadian rhythm \| red, far-red light phototransduction \| response to red or far red light \| red or far-red light signaling pathway \| far-red light si… Show annotation evidence eggNOG Preferred name: FHY3 \| Seed ortholog: 337451.A0A443N2S5 \| COG: S \| eggNOG OG: MULE@131567\|BE-8, MULE@1437183\|AKW-21!, MULE@2759\|Du-10, MULE@3398\|Wd-16, SWIM@131567\|Z-5, SWIM@1437183\|Bxs-27!, SWIM@3398\|Afq-22 GO GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009585 red, far-red light phototransduction; GO:0009639 response to red or far red light; GO:0010017 red or far-red light signaling pathway; GO:0010018 far-red light signaling pathway; GO:0010218... KEGG EC: ec:3.4.16.5 \| KO: K13289, K17604, K26145 \| Pathway: 04142 \| BRITE: 00001, 01000, 01002, 01009, 03110, 04131, 04147, 04990	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1282	Pa02g1282`Pa02g1282.1`	Pa02g1282 \| Pa02g1282.1 \| Pa02g1282.2 \| Pa02g1282.3 \| LOC104598292 \| 337451.A0A3S3MQ61 \| Prefoldin@131567\|Bm-9 \| K17560 \| 00001 \| 01009 \| Prefoldin_30_144 \| GO:0000077 \| GO:0000122 \| GO:0000993 \| GO:0001558 \| GO:0001731 \| GO:0003682 \| GO:0003714 \| GO... Show annotation evidence eggNOG Preferred name: LOC104598292 \| Seed ortholog: 337451.A0A3S3MQ61 \| eggNOG OG: Prefoldin@131567\|Bm-9 GO GO:0000077 DNA damage checkpoint signaling; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000993 RNA polymerase II complex binding; GO:0001558 regulation of cell growth; GO:0001731 formation of translation preinitiation complex; GO:0003682 chromatin binding; GO:0003714 transcription corepressor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654... KEGG KO: K17560 \| BRITE: 00001, 01009	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1285	Pa02g1285`Pa02g1285.1`	…640 \| GO:0071456 \| GO:1990110 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| response to heat \| red, far-red light phototransduction \| photomorphogenesis \| cellular respon… Show annotation evidence eggNOG Preferred name: CIGR2 \| Seed ortholog: 337451.A0A443N2N7 \| COG: S \| eggNOG OG: GRAS@131567\|n-8, GRAS@3193\|AX-10, GRAS@3398\|GW-15 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009585 red, far-red light phototransduction; GO:0009640 photomorphogenesis; GO:0071456 cellular response to hypoxia; GO:1990110 callus formation KEGG KO: K27748 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1346	Pa02g1346`Pa02g1346.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| DNA-binding transcription repressor activity \| DNA-binding transcription activator activity, RNA polymerase II-specific \| DNA binding \| chromatin bind… Show annotation evidence eggNOG Preferred name: LOC104235531 \| Seed ortholog: 337451.A0A443N2T8 \| COG: S \| eggNOG OG: CBFD_NFYB_HMF@131567\|BS-10, CBFD_NFYB_HMF@2759\|GM-15, CBFD_NFYB_HMF@33090\|Bcx-31, CBFD_NFYB_HMF@3398\|DEv-36 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001217 DNA-binding transcription repressor activity; GO:0001228 DNA-binding transcription activator... KEGG EC: ec:6.5.1.3 \| KO: K08065 \| Pathway: 04612, 05152, 05166 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1357	Pa02g1357`Pa02g1357.1`	…010093 \| GO:0010582 \| GO:0046983 \| GO:0048509 \| DNA binding \| protein binding \| nucleus \| transcription factor binding \| meristem determinacy \| specification of floral organ identity \| floral meristem determinacy \| protein dimerization activity \| regulation of meristem development Show annotation evidence eggNOG Preferred name: CMB1 \| Seed ortholog: 337451.A0A3S3M410 \| COG: S \| eggNOG OG: K-box@131567\|A-1, K-box@2759\|Ah-7, K-box@3398\|bX-16, SRF-TF@131567\|A-1, SRF-TF@2759\|C-2!, SRF-TF@3193\|jV-20, SRF-TF@3398\|DMa-32, SRF-TF@35493\|bP-19 GO GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008134 transcription factor binding; GO:0010022 meristem determinacy; GO:0010093 specification of floral organ identity; GO:0010582 floral meristem determinacy; GO:0046983 protein dimerization activity; GO:0048509 regulation of meristem development KEGG KO: K09264 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1468	Pa02g1468`Pa02g1468.1`	…lin binding \| protein-containing complex binding \| RNA polymerase II-specific DNA-binding transcription factor binding \| unfolded protein holdase activity \| ATP-dependent protein folding chaperone \| regulation of wax biosynthetic process Show annotation evidence eggNOG Preferred name: HSP70-16 \| Seed ortholog: 337451.A0A3S3NPY9 \| COG: COG0443 \| eggNOG OG: HSP70@131567\|MV-14, HSP70@2759\|AQf-22, HSP70@58023\|GSp-37 GO GO:0000774 adenyl-nucleotide exchange factor activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0016887 ATP hydrolysis activity; GO:0042277 peptide binding; GO:0043014 alpha-tubulin binding; GO:0044877 protein-containing complex binding; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:0140309 unfolded protein holdase... KEGG KO: K09489 \| Pathway: 04141, 04530, 04612, 05417 \| BRITE: 00001, 03110	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1483	Pa02g1483`Pa02g1483.1`	…22 \| GO:2000031 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytosol \| regulation of DNA-templated transcription \| response to heat \| response to water deprivation \| pollen development \| response to salt stress … Show annotation evidence eggNOG Preferred name: MYB44_3 \| Seed ortholog: 337451.A0A443N333 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AhB-29, Myb_DNA-binding@33090\|IFM-41 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0009555 pollen development; GO:0009651 response to salt stress; GO:0009737 response to... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g1484	Pa02g1484`Pa02g1484.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009867 \| GO:0042742 \| GO:0050832 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| jasmonic acid mediated signaling pathway \| defense response to bacterium \| defense response to fungus Show annotation evidence eggNOG Preferred name: BnaC02g43320D \| Seed ortholog: 337451.A0A3S3MAL9 \| COG: S \| eggNOG OG: WRKY@131567\|A-1*, WRKY@2759\|mD-20, WRKY@3398\|ABK-22 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042742 defense response to bacterium; GO:0050832 defense response to fungus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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