Feature identity
- Identifier
- PaHa09g16900
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,978 bp
- Genomic location
- 9:44,917,829–44,964,426
- Strand
- −
Hass · gene
PaHa09g16900
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,978
- bp
- 9:44,917,829–44,964,426
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: ESP4 | Seed ortholog: 337451.A0A443PXV9 | COG: S | eggNOG OG: SYMPK_PTA1_N@2759|A-1, SYMPK_PTA1_N@3398|Gn-13, Symplekin_C@2759|A-1, Symplekin_C@3398|Io-19
- Gene Ontology
- GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005847 mRNA cleavage and polyadenylation specificity factor complex; GO:0005849 mRNA cleavage factor complex; GO:0005886 plasma membrane; GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage; GO:0008033 tRNA processing; GO:0008150 biological_process; GO:0009410 response to xenobiotic stimulus; GO:0016604 nuclear body; GO:0030846 termination of RNA polymerase II transcription, poly(A)-coupled; GO:0031124 mRNA 3'-end processing; GO:0032091 negative regulation of protein binding; GO:0035363 histone locus body; GO:0061689 tricellular tight junction; GO:0070161 anchoring junction; GO:0071045 nuclear histone mRNA catabolic process; GO:0097165 nuclear stress granule; GO:0180010 co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway
- KEGG
- KO: K06100 | Pathway: 03015 | BRITE: 00001, 03019, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa09g16900.1
part_ofgenePaHa09g16900
