Feature identity
- Identifier
- PaHa_c256g00100
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,062 bp
- Genomic location
- unplaced_contig_256:16,971–18,297
- Strand
- −
Hass · gene
PaHa_c256g00100
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,062
- bp
- unplaced_contig_256:16,971–18,297
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: ppk23 | Seed ortholog: 1974281.A0A1V8VA20 | eggNOG OG: Pkinase|J61ES6@2759
- Gene Ontology
- GO:0002230 positive regulation of defense response to virus by host; GO:0004693 cyclin-dependent protein serine/threonine kinase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005700 polytene chromosome; GO:0005703 polytene chromosome puff; GO:0006351 DNA-templated transcription; GO:0006368 transcription elongation by RNA polymerase II; GO:0008024 cyclin/CDK positive transcription elongation factor complex; GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity; GO:0008380 RNA splicing; GO:0009408 response to heat; GO:0016607 nuclear speck; GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme complex; GO:0032783 super elongation complex; GO:0032968 positive regulation of transcription elongation by RNA polymerase II; GO:0034243 regulation of transcription elongation by RNA polymerase II; GO:0043405 regulation of MAP kinase activity; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0070691 P-TEFb complex
- KEGG
- EC: ec:2.7.11.22 | KO: K08818 | Pathway: 03250 | BRITE: 00001, 01000, 01001, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c256g00100
