West Indian T2T · gene

Pa07g1920

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

81,583
bp
Pa07:31,833,175–31,914,757
genomic location
Record overview

Feature identity

Identifier
Pa07g1920
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
81,583 bp
Genomic location
Pa07:31,833,175–31,914,757
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: AAPT1, LOC100285552, LOC112291621, LOC123131911 | Seed ortholog: 15368.I1HWH1, 337451.A0A3S3NF49, 42345.A0A2H3XBB0, 4432.A0A1U7ZVV8 | COG: COG0558 | eggNOG OG: CDP-OH_P_transf@131567|Af-7, CDP-OH_P_transf@4447|Fpk-31
Gene Ontology
GO:0001558 regulation of cell growth; GO:0004142 diacylglycerol cholinephosphotransferase activity; GO:0004307 ethanolaminephosphotransferase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005794 Golgi apparatus; GO:0006629 lipid metabolic process; GO:0006646 phosphatidylethanolamine biosynthetic process; GO:0006654 phosphatidic acid biosynthetic process; GO:0006656 phosphatidylcholine biosynthetic process; GO:0006657 CDP-choline pathway; GO:0006663 platelet activating factor biosynthetic process; GO:0008611 ether lipid biosynthetic process; GO:0008654 phospholipid biosynthetic process; GO:0016780 phosphotransferase activity, for other substituted phosphate groups; GO:0019992 diacylglycerol binding; GO:0042552 myelination; GO:0046474 glycerophospholipid biosynthetic process; GO:0047359 1-alkenyl-2-acylglycerol choline phosphotransferase activity; GO:0070567 cytidylyltransferase activity; GO:0101026 mitotic nuclear membrane biogenesis
KEGG
EC: ec:2.7.8.1 | KO: K00993 | Pathway: 00440, 00564, 00565, 01100, 01110 | Module: M00092 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.