Feature identity
- Identifier
- Pa09g1846
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 21,377 bp
- Genomic location
- Pa09:42,899,295–42,920,671
- Strand
- −
West Indian T2T · gene
Pa09g1846
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 21,377
- bp
- Pa09:42,899,295–42,920,671
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: IVD | Seed ortholog: 337451.A0A443PXT1 | COG: COG1960 | eggNOG OG: Acyl-CoA_dh_1@131567|AKv-18, Acyl-CoA_dh_M@131567|cW-15, Acyl-CoA_dh_N@131567|AlH-17
- Gene Ontology
- GO:0003853 short-chain 2-methyl fatty acyl-CoA dehydrogenase activity; GO:0005524 ATP binding; GO:0005739 mitochondrion; GO:0005759 mitochondrial matrix; GO:0005829 cytosol; GO:0006552 L-leucine catabolic process; GO:0008470 3-methylbutanoyl-CoA dehydrogenase activity; GO:0009083 branched-chain amino acid catabolic process; GO:0010230 alternative respiration; GO:1902190 2-methylbutanoyl-CoA(4-) catabolic process; GO:1902192 2-methylbut-2-enoyl-CoA(4-) metabolic process; GO:1902196 isovaleryl-CoA(4-) catabolic process; GO:1902198 3-methylbut-2-enoyl-CoA(4-) metabolic process
- KEGG
- EC: ec:1.3.8.4 | KO: K00253 | Pathway: 00280, 01100 | Module: M00036 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa09g1846.1
part_ofgenePa09g1846
