Pa09g1846.1

West Indian T2T · mRNA

Pa09g1846.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,236
bp
Pa09:42,899,295–42,920,671
genomic location
Record overview

Feature identity

Identifier
Pa09g1846.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,236 bp
Genomic location
Pa09:42,899,295–42,920,671
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa09g1846

eggNOG
Preferred name: IVD | Seed ortholog: 337451.A0A443PXT1 | COG: COG1960 | eggNOG OG: Acyl-CoA_dh_1@131567|AKv-18, Acyl-CoA_dh_M@131567|cW-15, Acyl-CoA_dh_N@131567|AlH-17
Gene Ontology
GO:0003853 short-chain 2-methyl fatty acyl-CoA dehydrogenase activity; GO:0005524 ATP binding; GO:0005739 mitochondrion; GO:0005759 mitochondrial matrix; GO:0005829 cytosol; GO:0006552 L-leucine catabolic process; GO:0008470 3-methylbutanoyl-CoA dehydrogenase activity; GO:0009083 branched-chain amino acid catabolic process; GO:0010230 alternative respiration; GO:1902190 2-methylbutanoyl-CoA(4-) catabolic process; GO:1902192 2-methylbut-2-enoyl-CoA(4-) metabolic process; GO:1902196 isovaleryl-CoA(4-) catabolic process; GO:1902198 3-methylbut-2-enoyl-CoA(4-) metabolic process
KEGG
EC: ec:1.3.8.4 | KO: K00253 | Pathway: 00280, 01100 | Module: M00036 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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