Hass · gene

PaHa03g03180

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,093
bp
3:6,691,572–6,711,516
genomic location
Record overview

Feature identity

Identifier
PaHa03g03180
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
3,093 bp
Genomic location
3:6,691,572–6,711,516
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104233100 | Seed ortholog: 337451.A0A3S3M1N4 | COG: S | eggNOG OG: MIF4G@131567|A-1*, MIF4G@2759|Od-17, MIF4G@3398|ASk-27
Gene Ontology
GO:0001671 ATPase activator activity; GO:0002183 cytoplasmic translational initiation; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003743 translation initiation factor activity; GO:0005198 structural molecule activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006139 nucleobase-containing compound metabolic process; GO:0006412 translation; GO:0006413 translational initiation; GO:0006446 regulation of translational initiation; GO:0007498 mesoderm development; GO:0007507 heart development; GO:0008135 translation factor activity, RNA binding; GO:0008150 biological_process; GO:0009615 response to virus; GO:0010507 negative regulation of autophagy; GO:0010608 post-transcriptional regulation of gene expression; GO:0016070 RNA metabolic process; GO:0022416 chaeta development; GO:0030307 positive regulation of cell growth; GO:0031369 translation initiation factor binding; GO:0034063 cytoplasmic stress granule assembly; GO:0042149 cellular response to glucose starvation; GO:0042273 ribosomal large subunit biogenesis; GO:0045727 positive regulation of translation; GO:0045773 positive regulation of axon extension; GO:0051246 regulation of protein metabolic process; GO:0055086 nucleobase-containing small molecule metabolic process; GO:0060999 positive regulation of dendritic spine development; GO:0140693 molecular condensate scaffold activity; GO:1900103 positive regulation of endoplasmic reticulum unfolded protein response; GO:1901195 positive regulation of formation of translation preinitiation complex
KEGG
KO: K03260 | Pathway: 05416 | BRITE: 00001, 03012, 03019
Biological context

Connected feature records

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