Feature identity
- Identifier
- PaHa03g09920
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 5,007 bp
- Genomic location
- 3:19,620,547–19,690,363
- Strand
- +
Hass · gene
PaHa03g09920
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 5,007
- bp
- 3:19,620,547–19,690,363
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: NRPA1 | Seed ortholog: 337451.A0A443NBT7 | COG: COG0086 | eggNOG OG: RNA_pol_Rpb1_2@131567|A-1, RNA_pol_Rpb1_3@131567|A-1, RNA_pol_Rpb1_4@131567|A-1, RNA_pol_Rpb1_5@131567|A-1
- Gene Ontology
- GO:0000287 magnesium ion binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006360 transcription by RNA polymerase I; GO:0006361 transcription initiation at RNA polymerase I promoter; GO:0006362 transcription elongation by RNA polymerase I; GO:0006363 termination of RNA polymerase I transcription; GO:0006366 transcription by RNA polymerase II; GO:0008270 zinc ion binding; GO:0008340 determination of adult lifespan; GO:0009303 rRNA transcription; GO:0009506 plasmodesma; GO:0034062 5'-3' RNA polymerase activity; GO:0042790 nucleolar large rRNA transcription by RNA polymerase I; GO:0071667 DNA/RNA hybrid binding; GO:1904750 negative regulation of protein localization to nucleolus; GO:1990841 promoter-specific chromatin binding
- KEGG
- EC: ec:2.7.7.6 | KO: K02999 | Pathway: 03020 | BRITE: 00001, 01000, 01611, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa03g09920.1
part_ofgenePaHa03g09920
