Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa02g43920	PaHa02g43920`PaHa02g43920.1`	…_bind@3398\|K-4 \| S \| GAGA_bind_1_284 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: BBR \| Seed ortholog: 337451.A0A443N9H0 \| COG: S \| eggNOG OG: GAGA_bind@131567\|A-1*, GAGA_bind@3193\|B-2, GAGA_bind@3398\|K-4 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g43930	PaHa02g43930`PaHa02g43930.1`	…091 \| GO:0030154 \| GO:0048497 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| plant-type cell wall loosening \| trichome branching \| cell differentiation \| maintenance of floral organ identity Show annotation evidence eggNOG Preferred name: HDG11 \| Seed ortholog: 337451.A0A3S4NBX2 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@35493\|CIj-25, START@131567\|e-5, START@2759\|CM-9!, START@3398\|ABq-20, START@35493\|Xd-16 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009828 plant-type cell wall loosening; GO:0010091 trichome branching; GO:0030154 cell differentiation; GO:0048497 maintenance of floral organ identity KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g44180	PaHa02g44180`PaHa02g44180.1`	…74 \| GO:2000652 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to water deprivation \| response to abscisic acid \| plant-type secondary cell wall biogenesis \| negative regulation of secondary cell wall bio… Show annotation evidence eggNOG Preferred name: LOC104611090 \| Seed ortholog: 337451.A0A443N9D7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AhB-29, Myb_DNA-binding@33090\|IFL-41, Myb_DNA-binding@3398\|JGJ-42 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009834 plant-type secondary cell wall biogenesis; GO:1901347 negative regulation of secondary cell wall biogenesis; GO:1901348 positive regulation of... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g44300	PaHa02g44300`PaHa02g44300.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| transcription coregulator binding \| transcription corepressor binding \| transcription coactivato… Show annotation evidence eggNOG Preferred name: HB11 \| Seed ortholog: 337451.A0A3S3N9C2 \| COG: S \| eggNOG OG: HALZ@131567\|y-8, HALZ@3193\|Be-11, HALZ@3398\|fC-19, HALZ@35493\|Au-10, HD-ZIP_N@131567\|A-1*, HD-ZIP_N@3193\|y-12, Homeodomain@131221\|HaM-32, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|QMa-38, Homeodomain@3398\|bFR-44, Homeodomain@35493\|BwP-25 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity,... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g44610	PaHa02g44610`PaHa02g44610.1`	PaHa02g44610 \| PaHa02g44610.1 \| LOC101244604 \| 337451.A0A3S4NNE8 \| KH_2@131567\|O-5 \| KH_2@1437183\|KPO-47 \| Ribosomal_S3_C@131567\|A-1 \| Ribosomal_S3_C@35493\|fr-21 \| S \| ec:2.3.1.16 \| K02985 \| 03010 \| M00087 \| M00113 \| M00861 \| 00001 \| 01610 \| 03011 \| KH_2_20... Show annotation evidence eggNOG Preferred name: LOC101244604 \| Seed ortholog: 337451.A0A3S4NNE8 \| COG: S \| eggNOG OG: KH_2@131567\|O-5, KH_2@1437183\|KPO-47, Ribosomal_S3_C@131567\|A-1, Ribosomal_S3_C@35493\|fr-21 GO GO:0000054 ribosomal subunit export from nucleus; GO:0000056 ribosomal small subunit export from nucleus; GO:0000278 mitotic cell cycle; GO:0000325 plant-type vacuole; GO:0002181 cytoplasmic translation; GO:0003729 mRNA binding; GO:0003735 structural constituent of ribosome; GO:0005730 nucleolus; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006281 DNA repair; GO:0006284 base-excision repair; GO:0006412... KEGG EC: ec:2.3.1.16 \| KO: K02985 \| Pathway: 03010 \| Module: M00087, M00113, M00861 \| BRITE: 00001, 01610, 03011	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g44700	PaHa02g44700`PaHa02g44700.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006633 \| GO:0006970 \| GO:0010023 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| fatty acid biosynthetic process \| response to osmotic stress \| proanthocyanidin biosynthetic process Show annotation evidence eggNOG Preferred name: LOC107908226 \| Seed ortholog: 337451.A0A3S4NC17 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|JLw-42 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g44710	PaHa02g44710`PaHa02g44710.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006633 \| GO:0006970 \| GO:0010023 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| fatty acid biosynthetic process \| response to osmotic stress \| proanthocyanidin biosynthetic process Show annotation evidence eggNOG Preferred name: LOC107908226 \| Seed ortholog: 337451.A0A3S3MEZ0 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|JLw-42 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g44720	PaHa02g44720`PaHa02g44720.1`	…GO:0045892 \| GO:0045893 \| GO:0048481 \| GO:0048629 \| GO:0090377 \| GO:0090378 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| trichome morphogenesis \| sequence-specific DNA binding \| negative regulation of DNA-templated transcription \| positive regul… Show annotation evidence eggNOG Preferred name: LOC108994334 \| Seed ortholog: 337451.A0A3S3M8M1 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJi-41, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|HJx-40 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010090 trichome morphogenesis; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0048481 plant ovule development; GO:0048629 trichome patterning; GO:0090377 seed... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g44800	PaHa02g44800`PaHa02g44800.1`	…27744 \| 00001 \| 03000 \| GRAS_145_546 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: NSP1 \| Seed ortholog: 337451.A0A3S3MUQ4 \| COG: S \| eggNOG OG: GRAS@131567\|Ad-10, GRAS@3193\|Dc-13 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K27744 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g00600	PaHa03g00600`PaHa03g00600.1`	…57 \| GO:2000306 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| transcription coregulator activity \| protein binding \| nucleus \| nucleolus \| cytoplasm \| regulation of DNA-templated transcription \| circadian rhythm \| biological_process \| zinc … Show annotation evidence eggNOG Preferred name: COL2 \| Seed ortholog: 4432.A0A1U8AZA9 \| COG: S \| eggNOG OG: zf-B_box@2759\|B-2!, zf-B_box@3193\|BZ-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003712 transcription coregulator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0008150 biological_process; GO:0008270 zinc ion binding;... KEGG KO: K12135 \| Pathway: 04712 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g00620	PaHa03g00620`PaHa03g00620.1`	…GO:0009867 \| GO:0042803 \| GO:0048831 \| GO:0055062 \| GO:0080040 \| GO:0140297 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| jasmonic acid mediated signaling pathway \| protein homodimerization activity \| regulation of s… Show annotation evidence eggNOG Preferred name: LOC104609081 \| Seed ortholog: 337451.A0A443N9P0 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|DyJ-28, HLH@33090\|AAF-17, HLH@35493\|Aps-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042803 protein homodimerization activity; GO:0048831 regulation of shoot system development; GO:0055062 phosphate ion homeostasis; GO:0080040 positive regulation of cellular response...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g00700	PaHa03g00700`PaHa03g00700.1`	…GO:0048366 \| GO:0048441 \| GO:0048442 \| GO:0048589 \| GO:0048829 \| GO:0051301 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| pattern specification process \| auxin-activated signaling pathway \| abscisic acid-activated signaling pathway \| response to carbohydrate \| fruit devel… Show annotation evidence eggNOG Preferred name: ARF18 \| Seed ortholog: 337451.A0A443Q0V6 \| COG: S \| eggNOG OG: Auxin_resp@131221\|AX-8, Auxin_resp@131567\|A-1, Auxin_resp@2759\|O-4, Auxin_resp@3398\|Gd-14, B3@131221\|AHw-20, B3@131567\|A-1, B3@3193\|BOp-25, B3@33090\|Id-12, B3@3398\|CGu-29 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007389 pattern specification process; GO:0009734 auxin-activated signaling pathway; GO:0009738 abscisic acid-activated signaling pathway; GO:0009743 response to carbohydrate; GO:0010154 fruit development; GO:0031540 regulation of anthocyanin biosynthetic process; GO:0035198 miRNA binding; GO:0048366 leaf... KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g00860	PaHa03g00860`PaHa03g00860.1`	…742 \| GO:1990841 \| GO:2000022 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| calmodulin binding \| nucleus \| response to bacterium \| induced systemic resistance \| response to abscisic acid \| response to gibberellin \| negative regulation o… Show annotation evidence eggNOG Preferred name: WRKY11 \| Seed ortholog: 337451.A0A443N9S6 \| COG: S \| eggNOG OG: Plant_zn_clust@131567\|A-1, Plant_zn_clust@1437183\|u-6!, Plant_zn_clust@3193\|C-2, Plant_zn_clust@3398\|O-4, WRKY@131567\|A-1, WRKY@1437183\|ArP-27, WRKY@2759\|CB-10, WRKY@3193\|lG-20, WRKY@33090\|Ic-14, WRKY@3398\|zS-22 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009617 response to bacterium; GO:0009682 induced systemic resistance; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0009938 negative regulation of gibberellic acid mediated signaling pathway;... KEGG KO: K13425 \| Pathway: 04016, 04626 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g00940	PaHa03g00940`PaHa03g00940.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| transcription coregulator binding \| transcription corepressor binding \| transcription coactivato… Show annotation evidence eggNOG Preferred name: LOC104603150 \| Seed ortholog: 337451.A0A443N9U4 \| COG: S \| eggNOG OG: HALZ@131221\|FW-14, HALZ@131567\|y-8, HALZ@35493\|At-10, Homeodomain@131221\|HaM-32, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|NCH-36, Homeodomain@35493\|BwP-25 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity,... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g01310	PaHa03g01310`PaHa03g01310.1`	…74 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006355 \| molecular_function \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: BHLH146 \| Seed ortholog: 337451.A0A3S3MUX8 \| COG: S \| eggNOG OG: UNK.I4KP@3398\|A-1 GO GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g01390	PaHa03g01390`PaHa03g01390.1`	…631 \| GO:0042273 \| GO:0090070 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| cytosol \| plasma membrane \| regulation of DNA-templated transcription \| rRNA processing \| cold acclimation \| ribosomal large subunit bioge… Show annotation evidence eggNOG Preferred name: REIL1 \| Seed ortholog: 337451.A0A443N9W8 \| COG: S \| eggNOG OG: zf-C2H2_2@131567\|A-1*, zf-C2H2_2@2759\|Bg-11 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0006364 rRNA processing; GO:0009631 cold acclimation; GO:0042273 ribosomal large subunit biogenesis; GO:0090070 positive regulation... KEGG EC: ec:2.1.1.319 \| KO: K14816 \| Pathway: 03040, 04391 \| BRITE: 00001, 03009	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g01400	PaHa03g01400`PaHa03g01400.1`	…631 \| GO:0042273 \| GO:0090070 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| cytosol \| plasma membrane \| regulation of DNA-templated transcription \| rRNA processing \| cold acclimation \| ribosomal large subunit bioge… Show annotation evidence eggNOG Preferred name: REIL1 \| Seed ortholog: 337451.A0A443N9W8 \| COG: S \| eggNOG OG: zf-C2H2_2@131567\|A-1*, zf-C2H2_2@2759\|Bg-11 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0006364 rRNA processing; GO:0009631 cold acclimation; GO:0042273 ribosomal large subunit biogenesis; GO:0090070 positive regulation... KEGG EC: ec:2.1.1.319 \| KO: K14816 \| Pathway: 03040, 04391 \| BRITE: 00001, 03009	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g01450	PaHa03g01450`PaHa03g01450.1`	…92 \| GO:1990110 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| post-embryonic development \| seed germination \| lateral root formation \| positive regulation of embryonic development \| root… Show annotation evidence eggNOG Preferred name: LOC104603172 \| Seed ortholog: 337451.A0A3S3N9M7 \| COG: S \| eggNOG OG: AP2@131567\|Eo-12, AP2@3193\|Apr-24, AP2@33090\|Xs-18, AP2@3398\|CFq-27, AP2@58023\|BJE-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009791 post-embryonic development; GO:0009845 seed germination; GO:0010311 lateral root formation; GO:0040019 positive regulation of embryonic development; GO:0048364 root development; GO:0060771... KEGG KO: K09285 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g01610	PaHa03g01610`PaHa03g01610.1`	…GO:0043565 \| GO:0045892 \| GO:0060860 \| GO:0060862 \| GO:0080050 \| GO:1901347 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| sequence-specific DNA binding \| negative regulation of DNA-templated transcription \| regulation of floral … Show annotation evidence eggNOG Preferred name: LOC103718394 \| Seed ortholog: 337451.A0A443N9V7 \| COG: S \| eggNOG OG: UNK.EP8F@131567\|A-1*, UNK.EP8F@1437183\|j-7, UNK.EP8F@3193\|B-2, UNK.EP8F@3398\|b-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0060860 regulation of floral organ abscission; GO:0060862 negative regulation of floral organ abscission; GO:0080050 regulation of seed development; GO...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g01780	PaHa03g01780`PaHa03g01780.1`	…226 \| GO:0050801 \| GO:2000067 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| negative regulation of cell population proliferation \| cell differentiation \| endodermal cell differentiation \| positive regulation of cell differentiation \| negative r… Show annotation evidence eggNOG Preferred name: LOC104599102 \| Seed ortholog: 337451.A0A3S4NCF7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|KPo-43, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|Ntj-46, Myb_DNA-binding@35493\|JKf-42, Myb_DNA-binding@58023\|Mip-45 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0030154 cell differentiation; GO:0035987 endodermal cell differentiation; GO:0045597 positive regulation of cell differentiation; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g02400	PaHa03g02400`PaHa03g02400.1`	…507 \| GO:0009742 \| GO:0040008 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| chloroplast \| brassinosteroid mediated signaling pathway \| regulation of growth Show annotation evidence eggNOG Preferred name: LOC107928278 \| Seed ortholog: 337451.A0A3S3N9R9 \| COG: S \| eggNOG OG: UNK.LG8Z@131567\|A-1*, UNK.LG8Z@3398\|c-5 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0009507 chloroplast; GO:0009742 brassinosteroid mediated signaling pathway; GO:0040008 regulation of growth	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g02790	PaHa03g02790`PaHa03g02790.1`	…33 \| GO:2000144 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| seed germination \| regulation of seed germination \| trichome morphogenesis \| seed coat development \| cell differentiation \| sequence-specific DNA bind… Show annotation evidence eggNOG Preferred name: 11437324 \| Seed ortholog: 337451.A0A443NA58 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@3193\|EBq-28, Homeodomain@3398\|Hxb-32, Homeodomain@35493\|DQH-27, START@131567\|e-5, START@2759\|CM-9!, START@3398\|tU-19!, START@35493\|eI-17 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009845 seed germination; GO:0010029 regulation of seed germination; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0030154 cell differentiation; GO:0043565 sequence-specific DNA binding; GO:0048354 mucilage... KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g02820	PaHa03g02820`PaHa03g02820.1`	…33 \| GO:2000144 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| seed germination \| regulation of seed germination \| trichome morphogenesis \| seed coat development \| cell differentiation \| sequence-specific DNA bind… Show annotation evidence eggNOG Preferred name: 11437324 \| Seed ortholog: 337451.A0A443NA58 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@3193\|EBq-28, Homeodomain@3398\|Hxb-32, Homeodomain@35493\|DQH-27, START@131567\|e-5, START@2759\|CM-9!, START@3398\|tU-19!, START@35493\|eI-17 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009845 seed germination; GO:0010029 regulation of seed germination; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0030154 cell differentiation; GO:0043565 sequence-specific DNA binding; GO:0048354 mucilage... KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g02830	PaHa03g02830`PaHa03g02830.1`	…33 \| GO:2000144 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| seed germination \| regulation of seed germination \| trichome morphogenesis \| seed coat development \| cell differentiation \| sequence-specific DNA bind… Show annotation evidence eggNOG Preferred name: 11437324 \| Seed ortholog: 337451.A0A3S3MFF8 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@3193\|EBq-28, Homeodomain@3398\|Hxb-32, Homeodomain@35493\|DQH-27, START@131567\|e-5, START@2759\|CM-9!, START@3398\|tU-19!, START@35493\|eI-17 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009845 seed germination; GO:0010029 regulation of seed germination; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0030154 cell differentiation; GO:0043565 sequence-specific DNA binding; GO:0048354 mucilage... KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g02840	PaHa03g02840`PaHa03g02840.1`	…723 \| GO:1901959 \| GO:1904278 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| DNA binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| respon… Show annotation evidence eggNOG Preferred name: LOC104224544 \| Seed ortholog: 337451.A0A443NA35 \| COG: S \| eggNOG OG: AP2@131567\|Eo-12, AP2@3193\|Bfh-26, AP2@33090\|Xs-18, AP2@3398\|ExS-31! GO GO:0000976 transcription cis-regulatory region binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0010187... KEGG KO: K09285 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g03000	PaHa03g03000`PaHa03g03000.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC108511758 \| Seed ortholog: 4432.A0A1U7ZSP0 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@1437183\|Arh-29, LRR_8@3398\|Fa-15, NB-ARC@131567\|AC-6, NB-ARC@1437183\|GNn-36, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sa-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g03180	PaHa03g03180`PaHa03g03180.1`	PaHa03g03180 \| PaHa03g03180.1 \| LOC104233100 \| 337451.A0A3S3M1N4 \| MIF4G@131567\|A-1* \| MIF4G@2759\|Od-17 \| MIF4G@3398\|ASk-27 \| S \| K03260 \| 05416 \| 00001 \| 03012 \| 03019 \| MIF4G_358_583 \| MIF4G_618_841 \| MIF4G_98_323 \| GO:0001671 \| GO:0002183 \| GO:0003676 \|... Show annotation evidence eggNOG Preferred name: LOC104233100 \| Seed ortholog: 337451.A0A3S3M1N4 \| COG: S \| eggNOG OG: MIF4G@131567\|A-1*, MIF4G@2759\|Od-17, MIF4G@3398\|ASk-27 GO GO:0001671 ATPase activator activity; GO:0002183 cytoplasmic translational initiation; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003743 translation initiation factor activity; GO:0005198 structural molecule activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006139 nucleobase-containing compound metabolic process; GO:0006412 translation; GO:0006413... KEGG KO: K03260 \| Pathway: 05416 \| BRITE: 00001, 03012, 03019	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g03360	PaHa03g03360`PaHa03g03360.1`	…19 \| S \| WRKY_250_304 \| WRKY_413_470 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| DNA-binding transcription factor activity \| protein binding \| nucleus Show annotation evidence eggNOG Preferred name: LOC110803333 \| Seed ortholog: 337451.A0A3S3NUJ1 \| COG: S \| eggNOG OG: WRKY@131567\|A-1*, WRKY@2759\|Uo-17, WRKY@33090\|fR-19 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g03390	PaHa03g03390`PaHa03g03390.1`	PaHa03g03390 \| PaHa03g03390.1 \| BnaA04g14170D \| 337451.A0A3S3MV88 \| LRR_1@131567\|AkJ-19 \| LRR_1@1437183\|Hgq-31 \| LRR_1@2759\|BDd-20 \| LRR_1@3193\|EIm-26 \| LRR_1@33090\|CwW-24 \| LRR_6@131567\|nU-18 \| LRR_6@2759\|we-19 \| LRR_6@3193\|Flv-30 \| LRR_6@35493\|DRA-27 \|... Show annotation evidence eggNOG Preferred name: BnaA04g14170D \| Seed ortholog: 337451.A0A3S3MV88 \| COG: S \| eggNOG OG: LRR_1@131567\|AkJ-19, LRR_1@1437183\|Hgq-31, LRR_1@2759\|BDd-20, LRR_1@3193\|EIm-26, LRR_1@33090\|CwW-24, LRR_6@131567\|nU-18, LRR_6@2759\|we-19, LRR_6@3193\|Flv-30, LRR_6@35493\|DRA-27, LRR_8@131567\|gj-23, LRR_8@2759\|BDN-29, LRR_8@3193\|FcU-35, PK_Tyr_Ser-Thr@131567\|TO-14, PK_Tyr_Ser-Thr@3193\|HMl-33, PK_Tyr_Ser-Thr@35493\|DRm-27, PK_Tyr... GO GO:0000302 response to reactive oxygen species; GO:0000325 plant-type vacuole; GO:0001932 regulation of protein phosphorylation; GO:0002221 pattern recognition receptor signaling pathway; GO:0002224 toll-like receptor signaling pathway; GO:0002229 defense response to oomycetes; GO:0002237 response to molecule of bacterial origin; GO:0002238 response to molecule of fungal origin; GO:0002446 neutrophil mediated... KEGG EC: ec:2.7.11.1 \| KO: K00924 \| Pathway: 04075 \| BRITE: 00001, 01000, 01001 \| CAZy: CBM57\|Carbohydrate-Binding Module Family 57.	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa03g03560	PaHa03g03560`PaHa03g03560.1`	…nse to molecule of bacterial origin \| response to molecule of fungal origin \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| defense response \| response to cold \| response to water deprivation \| response to wounding \| r… Show annotation evidence eggNOG Preferred name: WRKY40 \| Seed ortholog: 337451.A0A443NA92 \| COG: S \| eggNOG OG: WRKY@131567\|A-1*, WRKY@2759\|Ea-12, WRKY@3398\|QN-16, WRKY@35493\|Io-14 GO GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0002238 response to molecule of fungal origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,418 genes for “transcription factor”

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