Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa01g2628	Pa01g2628`Pa01g2628.1`	…364 \| GO:0048366 \| GO:0048825 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| identical protein binding \| root development \| leaf development \| cotyledon development Show annotation evidence eggNOG Preferred name: CRF2 \| Seed ortholog: 337451.A0A443NNZ2 \| eggNOG OG: AP2@131567\|Ho-14, AP2@3193\|iy-20, AP2@3398\|CuF-29 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0042802 identical protein binding; GO:0048364 root development; GO:0048366 leaf development; GO:0048825 cotyledon development KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2665	Pa01g2665`Pa01g2665.1`	…r1_232_295 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0009791 \| GO:0080188 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| post-embryonic development \| gene silencing by siRNA-directed DNA methylation Show annotation evidence eggNOG Preferred name: RDM4 \| Seed ortholog: 42345.A0A2H3YJR9 \| COG: S \| eggNOG OG: Iwr1@2759\|A-1 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009791 post-embryonic development; GO:0080188 gene silencing by siRNA-directed DNA methylation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2714	Pa01g2714`Pa01g2714.1`	…-RK@33090\|Sl-22 \| S \| RWP-RK_103_150 \| GO:0003700 \| GO:0005634 \| GO:0009793 \| DNA-binding transcription factor activity \| nucleus \| embryo development ending in seed dormancy Show annotation evidence eggNOG Preferred name: LOC108511736 \| Seed ortholog: 337451.A0A443NP29 \| COG: S \| eggNOG OG: RWP-RK@131567\|Ep-12, RWP-RK@2759\|NG-19, RWP-RK@33090\|Sl-22 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009793 embryo development ending in seed dormancy	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2728	Pa01g2728`Pa01g2728.1`	…nucleus \| biological_process \| zinc ion binding \| identical protein binding \| DNA-binding transcription factor binding \| transcription regulator inhibitor activity Show annotation evidence eggNOG Preferred name: UBA1C \| Seed ortholog: 337451.A0A3S3NIE0 \| COG: S \| eggNOG OG: zf-LYAR@2759\|A-1, zf-met@131567\|B-2 GO GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0042802 identical protein binding; GO:0140297 DNA-binding transcription factor binding; GO:0140416 transcription regulator inhibitor activity KEGG KO: K15263 \| Pathway: 03040 \| BRITE: 00001, 03000, 03009	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2746	Pa01g2746`Pa01g2746.1`	…04626 \| 00001 \| 03000 \| WRKY_146_203 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| DNA-binding transcription factor activity \| protein binding \| nucleus Show annotation evidence eggNOG Preferred name: WRKY29 \| Seed ortholog: 337451.A0A3S3MHZ0 \| COG: S \| eggNOG OG: WRKY@131567\|A-1*, WRKY@1437183\|ApT-27, WRKY@2759\|CB-10, WRKY@33090\|Lr-15, WRKY@3398\|AGJ-23 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus KEGG KO: K13425, K13426 \| Pathway: 04016, 04626 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2749	Pa01g2749`Pa01g2749.1`	…408 \| GO:0009414 \| GO:0045893 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to water deprivation \| positive regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC104602644 \| Seed ortholog: 337451.A0A443NPB0 \| eggNOG OG: CBFD_NFYB_HMF@131567\|BR-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0045893 positive regulation of DNA-templated transcription KEGG EC: ec:2.7.7.7 \| KO: K03506, K11656 \| Pathway: 03030, 03082, 03410, 03420 \| BRITE: 00001, 01000, 03032, 03036, 03400	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2753	Pa01g2753`Pa01g2753.1`	…GO:0005634 \| GO:0006355 \| GO:0009408 \| GO:0009567 \| GO:0016602 \| GO:0045893 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to heat \| double fertilization forming a zygote and endosperm \| CCAAT-binding factor complex \| positive regulation … Show annotation evidence eggNOG Preferred name: NFYA2 \| Seed ortholog: 337451.A0A3S5WGM1 \| COG: S \| eggNOG OG: CBFB_NFYA@2759\|A-1, CBFB_NFYA@33090\|u-9, CBFB_NFYA@3398\|BF-12 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009567 double fertilization forming a zygote and endosperm; GO:0016602 CCAAT-binding factor complex; GO:0045893 positive regulation of DNA-templated transcription KEGG KO: K08064 \| Pathway: 04612, 05017, 05152 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2765	Pa01g2765`Pa01g2765.1`	…ytosol \| plasma membrane \| nucleosome assembly \| chromatin remodeling \| immune response \| transcription factor binding \| biological_process \| aerobic respiration \| RNA modification \| cell surface \| membrane \| regulation of complement activation \| kininogen binding \| adrenergic receptor binding \| neg… Show annotation evidence eggNOG Preferred name: LOC101766526 \| Seed ortholog: 337451.A0A3S3MI03 \| COG: S \| eggNOG OG: MAM33@2759\|A-1, MAM33@3398\|FB-14 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000957 mitochondrial RNA catabolic process; GO:0001849 complement component C1q complex binding; GO:0003674 molecular_function; GO:0003714 transcription corepressor activity; GO:0003729 mRNA binding; GO:0004857 enzyme inhibitor activity; GO:0005080 protein kinase C binding; GO:0005515 protein binding; GO:0005540 hyaluronic acid binding; GO... KEGG EC: ec:5.6.2.7 \| KO: K12812, K15414, K19761 \| Pathway: 03013, 03015, 03040 \| BRITE: 00001, 00536, 01000, 03019, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2769	Pa01g2769`Pa01g2769.1`	Pa01g2769 \| Pa01g2769.1 \| Pa01g2769.2 \| UBP8 \| 337451.A0A3S3Q6P0 \| UCH@131567\|Hh-17 \| UCH@2759\|AiQ-26 \| UCH@3398\|KtA-42 \| S \| ec:3.4.19.12 \| K21343 \| 03083 \| 04137 \| 00001 \| 01000 \| 01002 \| 04121 \| 04131 \| UCH_166_757 \| GO:0000244 \| GO:0001222 \| GO:0002181 ... Show annotation evidence eggNOG Preferred name: UBP8 \| Seed ortholog: 337451.A0A3S3Q6P0 \| COG: S \| eggNOG OG: UCH@131567\|Hh-17, UCH@2759\|AiQ-26, UCH@3398\|KtA-42 GO GO:0000244 spliceosomal tri-snRNP complex assembly; GO:0001222 transcription corepressor binding; GO:0002181 cytoplasmic translation; GO:0003674 molecular_function; GO:0004197 cysteine-type endopeptidase activity; GO:0004843 cysteine-type deubiquitinase activity; GO:0005160 transforming growth factor beta receptor binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006511 ubiquitin... KEGG EC: ec:3.4.19.12 \| KO: K21343 \| Pathway: 03083, 04137 \| BRITE: 00001, 01000, 01002, 04121, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2773	Pa01g2773`Pa01g2773.1`	…700 \| GO:0005634 \| GO:0010158 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| abaxial cell fate specification Show annotation evidence eggNOG Preferred name: YAB2 \| Seed ortholog: 337451.A0A443NPA5 \| COG: S \| eggNOG OG: YABBY@2759\|C-2!, YABBY@3398\|Bm-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010158 abaxial cell fate specification KEGG KO: K25796 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2831	Pa01g2831`Pa01g2831.1`	…GO:0097718 \| GO:0140296 \| GO:0140297 \| RNA polymerase I transcription regulator complex \| transcription factor TFIIIB complex \| chromatin \| euchromatin \| transcription cis-regulatory region binding \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| RNA polymerase II core promo… Show annotation evidence eggNOG Preferred name: LOC101507215 \| Seed ortholog: 3880.A0A072UBM6 \| COG: S \| eggNOG OG: TBP@131567\|A-1, TBP@1437183\|AIg-34, TBP@2233839\|AVW-37, TBP@2759\|Hc-14, TBP@3398\|ABc-32 GO GO:0000120 RNA polymerase I transcription regulator complex; GO:0000126 transcription factor TFIIIB complex; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0000995 RNA polymerase III general... KEGG KO: K03120 \| Pathway: 03022 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2834	Pa01g2834`Pa01g2834.1`	…GO:0060261 \| GO:0070898 \| GO:0090575 \| RNA polymerase I transcription regulator complex \| transcription factor TFIIIB complex \| chromatin \| euchromatin \| RNA polymerase I preinitiation complex assembly \| female pronucleus \| male pronucleus \| protein binding \| nucleus \| nucleoplasm \| transcription re… Show annotation evidence eggNOG Preferred name: TBP1 \| Seed ortholog: 337451.A0A443NPE7 \| COG: S \| eggNOG OG: TBP@131567\|A-1, TBP@2759\|Hc-14, TBP@3398\|vJ-30 GO GO:0000120 RNA polymerase I transcription regulator complex; GO:0000126 transcription factor TFIIIB complex; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0001188 RNA polymerase I preinitiation complex assembly; GO:0001939 female pronucleus; GO:0001940 male pronucleus; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005667 transcription regulator complex; GO:0005668 RNA polymerase... KEGG KO: K03120 \| Pathway: 03022, 05016, 05017, 05165, 05166, 05203 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2859	Pa01g2859`Pa01g2859.1`	…c \| DNA binding \| double-stranded DNA binding \| single-stranded DNA binding \| DNA-binding transcription factor activity \| endonuclease activity \| protein binding \| nucleus \| double-strand break repair via nonhomologous end joining \| DNA catabolic process \| chromatin remodeling \| biological_process \|… Show annotation evidence eggNOG Preferred name: LOC100844373 \| Seed ortholog: 337451.A0A3S3Q6S9 \| COG: COG2940 \| eggNOG OG: Pre-SET@131567\|A-1*, Pre-SET@2759\|AT-7, SET@131567\|BQN-21, SET@2759\|DTp-26 GO GO:0000014 single-stranded DNA endonuclease activity; GO:0000729 DNA double-strand break processing; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003690 double-stranded DNA binding; GO:0003697 single-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0004519 endonuclease activity; GO:0005515 protein binding; GO:0005634... KEGG EC: ec:2.1.1.357 \| KO: K11433 \| Pathway: 00310, 01100 \| BRITE: 00001, 01000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2866	Pa01g2866`Pa01g2866.1`	…03029 \| 03036 \| 03400 \| GATA_202_236 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC116202350 \| Seed ortholog: 337451.A0A3S3NIJ5 \| COG: S \| eggNOG OG: GATA@131567\|A-1*, GATA@2759\|B-2!, GATA@3193\|Ad-8, GATA@58023\|Gn-13 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG EC: ec:2.7.11.22, ec:2.8.1.7, ec:5.6.2.7, ec:6.3.2.2 \| KO: K04487, K05626, K05628, K06669, K08817, K09182, K09183, K09184, K11204, K11339, K11648, K11660, K11770, K14809, K14972, K17604, K17894, K17895, K17896, K17897, K18658, K21630, K22040, K22184, K23194, K23407 \| Pathway: 00270, 00480, 00730, 01100, 01240, 03082, 03250, 04022, 04122, 04218, 04530, 04658, 04659, 04919, 04928, 05321 \| Module: M00118 \| BRITE:...	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2897	Pa01g2897`Pa01g2897.1`	…vity \| minor groove of adenine-thymine-rich DNA binding \| chromatin binding \| DNA-binding transcription factor activity \| transcription elongation factor activity \| transcription coactivator activity \| transcription corepressor activity \| RNA binding \| helicase activity \| histone acetyltransferase a… Show annotation evidence eggNOG Preferred name: LOC104223644 \| Seed ortholog: 337451.A0A443NPI0 \| COG: S \| eggNOG OG: PHD@131567\|A-1, PHD@1437183\|EZ-10, PHD@2759\|B-2!, TDBD@131567\|A-1, TDBD@2759\|Ai-9, TDBD@3193\|ES-13, TDBD@33090\|BM-10, TDBD@3398\|RB-18 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000212 meiotic spindle organization; GO:0000278 mitotic cell cycle; GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000724 double-strand break repair via homologous recombination; GO:0000727 double-strand break repair via... KEGG EC: ec:1.14.11.27, ec:1.14.11.65, ec:1.14.11.67, ec:2.1.1.354, ec:2.1.1.357, ec:2.1.1.369, ec:2.1.1.370, ec:2.1.1.371, ec:2.3.1.48, ec:2.3.2.27, ec:2.7.11.22, ec:2.7.11.23, ec:2.7.4.14, ec:2.8.3.13, ec:3.1.3.16, ec:5.6.2.6, ec:6.1.1.6 \| KO: K02603, K02606, K04498, K04567, K06062, K06101, K06672, K07117, K08819, K08881, K08882, K08883, K09186, K09187, K09188, K09189, K10276, K10603, K10638, K10728, K10875, K10896,...	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2944	Pa01g2944`Pa01g2944.1`	Pa01g2944 \| Pa01g2944.1 \| Pa01g2944.2 \| LOC100836783 \| LOC123133092 \| 337451.A0A443N0D5 \| 4565.A0A3B6PTA0 \| Ank@131567\|AAR-20 \| Ank@147368\|Xtb-47 \| Ank@2759\|AYf-22 \| Ank@4479\|TXN-42 \| Ank_2@131567\|BN-7 \| Ank_2@1437183\|Fga-21 \| Ank_2@147368\|AESs-40 \| Ank_2... Show annotation evidence eggNOG Preferred name: LOC100836783, LOC123133092 \| Seed ortholog: 337451.A0A443N0D5, 4565.A0A3B6PTA0 \| COG: S \| eggNOG OG: Ank@131567\|AAR-20, Ank@147368\|Xtb-47, Ank@2759\|AYf-22, Ank@4479\|TXN-42, Ank_2@131567\|BN-7, Ank_2@1437183\|Fga-21, Ank_2@147368\|AESs-40, Ank_2@147389\|AJMY-42, Ank_2@2759\|hc-12, Ank_2@4479\|zIK-38, Ank_2@4734\|NKS-25, Ank_4@131567\|GW-15, Ank_4@1437183\|IFX-31, Ank_5@131567\|LD-13, Ank_5@1437183\|Anj-21, Ank... GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000209 protein polyubiquitination; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0003674 molecular_function; GO... KEGG EC: ec:2.3.2.27 \| KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222, K10645, K15503, K21435, K21486 \| Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05417, 05418 \| BRITE: 00001, 01000, 01009, 03036, 03400, 04040, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2956	Pa01g2956`Pa01g2956.1`	…twork \| cytosol \| plasma membrane \| phospholipid transfer to membrane \| lipid transport \| transcription factor binding \| lipid binding \| response to water deprivation \| plant-type cell wall \| plasmodesma \| chloroplast \| chloroplast thylakoid \| response to salt stress \| response to abscisic acid \| cu… Show annotation evidence eggNOG Preferred name: NLTP2 \| Seed ortholog: 337451.A0A3S3MVT0 \| COG: S \| eggNOG OG: Tryp_alpha_amyl@131567\|A-1*, Tryp_alpha_amyl@2759\|Iu-12! GO GO:0003674 molecular_function; GO:0005516 calmodulin binding; GO:0005576 extracellular region; GO:0005768 endosome; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006649 phospholipid transfer to membrane; GO:0006869 lipid transport; GO:0008134 transcription factor binding; GO:0008289 lipid binding; GO:0009414 response to water deprivation; GO:0009505...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa01g2974	Pa01g2974`Pa01g2974.1`	…GO:0005634 \| GO:0006355 \| GO:0009637 \| GO:0045944 \| GO:0048366 \| GO:2000306 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to blue light \| positive regulation of transcription by RNA polymerase II \| leaf development \| po… Show annotation evidence eggNOG Preferred name: LOC109011062 \| Seed ortholog: 106549.A0A540KRE3 \| COG: S \| eggNOG OG: TCP@131567\|A-1*, TCP@1437201\|IX-15, TCP@2759\|F-3, TCP@3398\|AO-8, TCP@58023\|f-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009637 response to blue light; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048366 leaf development; GO:2000306 positive regulation of photomorphogenesis	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3009	Pa01g3009`Pa01g3009.1`	…gion binding \| defense response to nematode \| defense response to oomycetes \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to osmotic stress \| response to cold \| response to bacterium \| response to nematode \| response to… Show annotation evidence eggNOG Preferred name: WRKY70 \| Seed ortholog: 337451.A0A3S3Q860 \| COG: S \| eggNOG OG: WRKY@131567\|A-1*, WRKY@2759\|B-2, WRKY@3398\|J-4, WRKY@58023\|E-3 GO GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0002215 defense response to nematode; GO:0002229 defense response to oomycetes; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006970 response to osmotic stress; GO:0009409 response to cold; GO...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3011	Pa01g3011`Pa01g3011.1`	… development \| spermatogenesis \| brain development \| intracellular protein localization \| transcription factor binding \| poly(A) binding \| biological_process \| eukaryotic initiation factor 4E binding \| gonad development \| JUN kinase binding \| extrinsic apoptotic signaling pathway via death domain re… Show annotation evidence eggNOG Preferred name: LOC103706247 \| Seed ortholog: 337451.A0A443NPR4 \| COG: S \| eggNOG OG: DEAD@131567\|Fpr-34, DEAD@2759\|Jio-39!, Helicase_C\|82CO8R@131567 GO GO:0000390 spliceosomal complex disassembly; GO:0002151 G-quadruplex RNA binding; GO:0002183 cytoplasmic translational initiation; GO:0002753 cytoplasmic pattern recognition receptor signaling pathway; GO:0003677 DNA binding; GO:0003678 DNA helicase activity; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003727 single-stranded RNA binding; GO:0003729 mRNA binding; GO:0003743 translation initiation... KEGG EC: ec:5.6.2.7 \| KO: K12823 \| Pathway: 03040 \| BRITE: 00001, 01000, 03009, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3037	Pa01g3037`Pa01g3037.1`	…001 \| GO:2000022 \| GO:2000031 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to water deprivation \| response to salt stress \| response to abscisic acid \| r… Show annotation evidence eggNOG Preferred name: MYB44 \| Seed ortholog: 337451.A0A3S3M6Q1 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AhB-29, Myb_DNA-binding@58023\|FQV-38! GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0009751 response to salicylic acid; GO:0009753 response... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3082	Pa01g3082`Pa01g3082.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| transcription coregulator binding \| transcription corepressor binding \| transcription coactivato… Show annotation evidence eggNOG Preferred name: HAT5 \| Seed ortholog: 337451.A0A3S3NIW5 \| COG: S \| eggNOG OG: HALZ@131567\|X-6, HALZ@3193\|g-7, HALZ@3398\|Cx-13, HALZ@58023\|q-8, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|GUI-31, Homeodomain@3398\|bKt-44, Homeodomain@35493\|BwQ-25, Homeodomain@58023\|KGk-34 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987 cis-regulatory region... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3128	Pa01g3128`Pa01g3128.1`	…GO:0005634 \| GO:0009611 \| GO:0009789 \| GO:0043565 \| GO:0051301 \| GO:0071365 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to wounding \| positive regulation of abscisic acid-activated signaling pathway \| sequence-specific DNA binding \| cell division \| cellular res… Show annotation evidence eggNOG Preferred name: NAC74 \| Seed ortholog: 337451.A0A443NQ01 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@1437183\|Bdq-24, NAM@3193\|pA-16, NAM@3398\|Abs-20, NAM@35493\|AE-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0043565 sequence-specific DNA binding; GO:0051301 cell division; GO:0071365 cellular response to auxin stimulus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3152	Pa01g3152`Pa01g3152.1`	… Myb_DNA-binding_87_132 \| GO:0003700 \| GO:0009739 \| GO:0009744 \| GO:0045893 \| DNA-binding transcription factor activity \| response to gibberellin \| response to sucrose \| positive regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC103713598 \| Seed ortholog: 337451.A0A3S3MQJ3 \| eggNOG OG: Myb_DNA-binding@131567\|uC-23, Myb_DNA-binding@33090\|Hrq-41 GO GO:0003700 DNA-binding transcription factor activity; GO:0009739 response to gibberellin; GO:0009744 response to sucrose; GO:0045893 positive regulation of DNA-templated transcription KEGG KO: K22560, K23406, K24536 \| Pathway: 03082 \| BRITE: 00001, 03036, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3153	Pa01g3153`Pa01g3153.1`	… 04121 \| zf-CCCH_83_103 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009793 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| embryo development ending in seed dormancy Show annotation evidence eggNOG Preferred name: LOC103494870 \| Seed ortholog: 337451.A0A3S3MII1 \| eggNOG OG: zf-CCCH@131567\|Abo-26 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009793 embryo development ending in seed dormancy KEGG EC: ec:2.3.2.27 \| KO: K14405, K23047, K23048 \| Pathway: 03015 \| BRITE: 00001, 01000, 03019, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3157	Pa01g3157`Pa01g3157.1`	… oxygen species \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to cold \| response to nematode \| response to high light intensity \| response t… Show annotation evidence eggNOG Preferred name: ERF5 \| Seed ortholog: 337451.A0A3S3NIZ9 \| COG: S \| eggNOG OG: AP2@131567\|Eb-12, AP2@1437183\|hb-20!, AP2@33090\|Hk-14 GO GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009624 response to nematode; GO:0009644 response to high light... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3173	Pa01g3173`Pa01g3173.1`	…gion binding \| developmental process involved in reproduction \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| shade avoidance \| response to auxin \| auxin-activated signaling pathway \| response to cytokinin \| unidimensional cell growth \| shoot system morphogene… Show annotation evidence eggNOG Preferred name: LOC104610464 \| Seed ortholog: 337451.A0A3S3NJ10 \| COG: S \| eggNOG OG: HALZ@131567\|y-8, HALZ@3193\|Bd-11, HALZ@3398\|Ll-16, HALZ@35493\|Au-10, HD-ZIP_N@131567\|A-1*, HD-ZIP_N@3193\|d-9!, Homeodomain@131221\|HaM-32, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|Tih-40, Homeodomain@3398\|fHj-46, Homeodomain@35493\|BwP-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003006 developmental process involved in reproduction; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009641 shade avoidance; GO:0009733 response to auxin; GO:0009734 auxin-activated signaling pathway; GO:0009735 response to cytokinin; GO:0009826 unidimensional cell growth;... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3175	Pa01g3175`Pa01g3175.1`	…GO:0043565 \| GO:0044839 \| GO:0045893 \| GO:0048235 \| GO:0048555 \| GO:0055047 \| DNA-binding transcription factor activity \| nucleus \| sequence-specific DNA binding \| cell cycle G2/M phase transition \| positive regulation of DNA-templated transcription \| pollen sperm cell differentiation \| generative c… Show annotation evidence eggNOG Preferred name: DUO1 \| Seed ortholog: 337451.A0A3S3MW50 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|BKd-31, Myb_DNA-binding@131567\|AOS-27 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0043565 sequence-specific DNA binding; GO:0044839 cell cycle G2/M phase transition; GO:0045893 positive regulation of DNA-templated transcription; GO:0048235 pollen sperm cell differentiation; GO:0048555 generative cell nucleus; GO:0055047 generative cell mitosis KEGG EC: ec:1.17.99.9 \| KO: K09422 \| Pathway: 00190, 00860, 01100, 01110, 01240, 04626 \| Module: M00154 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3177	Pa01g3177`Pa01g3177.1`	…cription by RNA polymerase II \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to absence of light \| response to ethylene \| response to abscisic acid \| response to gibberellin … Show annotation evidence eggNOG Preferred name: KUA1 \| Seed ortholog: 337451.A0A3S4P7L7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|uC-23, Myb_DNA-binding@1437183\|QCZ-48, Myb_DNA-binding@33090\|LEw-44 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009646 response to absence of light; GO:0009723 response to ethylene; GO:0009737 response to abscisic acid; GO:0009739 response to... KEGG KO: K22560, K23406, K24536 \| Pathway: 03082 \| BRITE: 00001, 03036, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa01g3179	Pa01g3179`Pa01g3179.1`	…700 \| GO:0005634 \| GO:0009834 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| plant-type secondary cell wall biogenesis Show annotation evidence eggNOG Preferred name: LOC110794647 \| Seed ortholog: 337451.A0A443NQ38 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@1437183\|GWx-33, AP2@33090\|KR-15, AP2@3398\|AmB-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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