Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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Pa01g1830Pa01g1830.1

Pa01g1830 | Pa01g1830.1 | LOC103719222 | 337451.A0A443NMQ5 | PCI@131567|LE-15 | eIF3_N@2759|A-1 | S | ec:2.6.1.62 | ec:6.3.3.3 | K03250 | 03010 | M00123 | 00001 | 03012 | 03051 | 04147 | PCI_285_399 | eIF3_N_5_137 | GO:0003729 | GO:0005515 | GO:0005634 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC103719222 | Seed ortholog: 337451.A0A443NMQ5 | COG: S | eggNOG OG: PCI@131567|LE-15, eIF3_N@2759|A-1
GO
GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006352 DNA-templated transcription initiation; GO:0006412 translation; GO:0008180 COP9 signalosome; GO:0009640 photomorphogenesis; GO:0009908 flower development; GO:0030371 translation repressor activity; GO:0031597 cytosolic...
KEGG
EC: ec:2.6.1.62, ec:6.3.3.3 | KO: K03250 | Pathway: 03010 | Module: M00123 | BRITE: 00001, 03012, 03051, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa01g1833Pa01g1833.1

…GO:0046685 | GO:0046686 | GO:0060586 | GO:0071731 | GO:1900706 | GO:1990641 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | response to water deprivation | response to ethylene | regulation of ethylene-activated signal…

Show annotation evidence
eggNOG
Preferred name: ORG3 | Seed ortholog: 337451.A0A443NMS0 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Apu-20, HLH@33090|AAF-17, HLH@3398|BVC-22, HLH@35493|AbE-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009723 response to ethylene; GO:0010104 regulation of ethylene-activated signaling pathway; GO:0010106 cellular response to iron ion starvation; GO:0045893 positive regulation of DNA-templated...
eggNOGGO
eggNOG-inferred
Pa01g1877Pa01g1877.1

Pa01g1877 | Pa01g1877.1 | AGD11 | 337451.A0A3S5WGJ7 | ArfGap@131221|Di-9 | ArfGap@131567|A-1* | ArfGap@2759|M-4 | C2@131221|Hig-26 | C2@131567|JB-10 | C2@2759|UX-12! | S | ec:2.7.11.1 | K12486 | 04144 | 00001 | 04131 | ArfGap_16_132 | C2_202_292 | GO...

Show annotation evidence
eggNOG
Preferred name: AGD11 | Seed ortholog: 337451.A0A3S5WGJ7 | COG: S | eggNOG OG: ArfGap@131221|Di-9, ArfGap@131567|A-1*, ArfGap@2759|M-4, C2@131221|Hig-26, C2@131567|JB-10, C2@2759|UX-12!
GO
GO:0000281 mitotic cytokinesis; GO:0001410 chlamydospore formation; GO:0001786 phosphatidylserine binding; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0004175 endopeptidase activity; GO:0004674 protein serine/threonine kinase activity; GO:0005096 GTPase activator activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005544 calcium-dependent phospholipid binding; GO:0005545 1...
KEGG
EC: ec:2.7.11.1 | KO: K12486 | Pathway: 04144 | BRITE: 00001, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa01g1909Pa01g1909.1

…515 | GO:0005634 | GO:0006355 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

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eggNOG
Preferred name: BHLH62 | Seed ortholog: 337451.A0A3S3Q5W4 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Hdr-32, HLH@33090|AbH-19, HLH@3398|Mgj-36
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa01g1947Pa01g1947.1

Pa01g1947 | Pa01g1947.1 | LOC104589361 | 337451.A0A443NN26 | PBD@131567|A-1* | PBD@2759|wA-21 | PBD@3398|Efa-57 | S | ec:2.7.11.1 | K04409 | K04410 | K05733 | 04010 | 04011 | 04012 | 04014 | 04024 | 04062 | 04360 | 04392 | 04510 | 04625 | 04650 | 04660 |...

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eggNOG
Preferred name: LOC104589361 | Seed ortholog: 337451.A0A443NN26 | COG: S | eggNOG OG: PBD@131567|A-1*, PBD@2759|wA-21, PBD@3398|Efa-57
GO
GO:0000011 vacuole inheritance; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000131 incipient cellular bud site; GO:0000165 MAPK cascade; GO:0000282 cellular bud site selection; GO:0000749 response to pheromone triggering conjugation with cellular fusion; GO:0001402 signal transduction involved in filamentous growth; GO:0001403 invasive growth in response to glucose limitation; GO...
KEGG
EC: ec:2.7.11.1 | KO: K04409, K04410, K05733 | Pathway: 04010, 04011, 04012, 04014, 04024, 04062, 04360, 04392, 04510, 04625, 04650, 04660, 04666, 04810, 05132, 05170, 05205, 05211 | BRITE: 00001, 01000, 01001, 03036, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa01g1999Pa01g1999.1

…634 | GO:0006817 | GO:0046686 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | phosphate ion transport | response to cadmium ion

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eggNOG
Preferred name: WRKY75 | Seed ortholog: 337451.A0A443NND5 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@1437183|BJN-28, WRKY@2759|VE-17, WRKY@3398|tS-21
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006817 phosphate ion transport; GO:0046686 response to cadmium ion
eggNOGGO
eggNOG-inferred
Pa01g2010Pa01g2010.1

…O:0048481 | GO:0048833 | GO:0080001 | cell fate specification | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | flower development | specification of floral organ identity | seed coat development | plant ovule development | specification of floral organ number |…

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eggNOG
Preferred name: SEP3 | Seed ortholog: 337451.A0A443N7K4 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|Ah-7, K-box@3398|bY-16, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|jV-20, SRF-TF@3398|DMa-32, SRF-TF@35493|bP-19
GO
GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009908 flower development; GO:0010093 specification of floral organ identity; GO:0010214 seed coat development; GO:0048481 plant ovule development; GO:0048833 specification of floral organ number; GO:0080001 mucilage extrusion from seed coat
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g2027Pa01g2027.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | transcription coactivator binding | DNA-binding transcription repressor activity, RNA polymerase…

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eggNOG
Preferred name: CMTA4 | Seed ortholog: 337451.A0A3S3MAL7 | COG: S | eggNOG OG: Ank_2@131567|Mm-10, Ank_2@2759|BXW-16, Ank_2@3193|Xgb-28, CG-1@2759|A-1, CG-1@3193|Aj-9, CG-1@35493|P-5, IQ@131567|aD-16, IQ@35493|Alg-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001223 transcription coactivator...
KEGG
KO: K21596 | Pathway: 01523, 03440, 04010, 04014, 04024, 04062, 04064, 04066, 04071, 04075, 04151, 04210, 04211, 04218, 04380, 04613, 04620, 04621, 04622, 04623, 04624, 04625, 04657, 04658, 04659, 04660, 04662, 04668, 04722, 04820, 04917, 04920, 04926, 04931, 04932, 04933, 04936, 05010, 05022, 05030, 05132, 05133, 05134, 05135, 05140, 05142, 05145, 05146, 05152, 05160, 05161, 05162, 05163, 05164, 05165, 05166,...
eggNOGGOKEGG
eggNOG-inferred
Pa01g2049Pa01g2049.1

…93|AE-6 | S | NAM_5_136 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

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eggNOG
Preferred name: NAC090 | Seed ortholog: 337451.A0A3S4NPX3 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|ob-16, NAM@3398|wl-17, NAM@35493|AE-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa01g2053Pa01g2053.1

…binding | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of cell size | anatomical structure morphogenesis | sequence-specific DNA binding | negative re…

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eggNOG
Preferred name: LOC110785696 | Seed ortholog: 337451.A0A443N7I3 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|DK-11, TCP@3398|Fm-13
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009653 anatomical structure morphogenesis; GO:0043565 sequence-specific DNA...
eggNOGGO
eggNOG-inferred
Pa01g2078Pa01g2078.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

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eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A443NNC6 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa01g2115Pa01g2115.1

…O:0008285 | GO:0009637 | GO:0045944 | GO:0048366 | GO:2000306 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | negative regulation of cell population proliferation | response to blue light | positive regulation of tra…

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eggNOG
Preferred name: TCP2 | Seed ortholog: 337451.A0A3S3Q9D2 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|AO-8, TCP@58023|f-6
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009637 response to blue light; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048366 leaf development; GO:2000306 positive regulation of...
eggNOGGO
eggNOG-inferred
Pa01g2116Pa01g2116.1

…020 | GO:0045893 | GO:2000377 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | cytoplasm | endoplasmic reticulum membrane | plasma membrane | response to high light intensity | drought recovery | regulation of flavonoid biosynthetic process | leaf…

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eggNOG
Preferred name: NAC078 | Seed ortholog: 337451.A0A443PVJ0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|oz-16, NAM@35493|AE-6, NAM@58023|Abm-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005789 endoplasmic reticulum membrane; GO:0005886 plasma membrane; GO:0009644 response to high light intensity; GO:0009819 drought recovery; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010150 leaf senescence; GO:0016020 membrane; GO:0045893...
eggNOGGO
eggNOG-inferred
Pa01g2126Pa01g2126.1

…57 | GO:2000306 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | transcription coregulator activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | circadian rhythm | zinc ion binding | response to light s…

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eggNOG
Preferred name: LOC104245655 | Seed ortholog: 337451.A0A3S3NI11 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@3193|BT-10, zf-B_box@3398|KY-15, zf-B_box@35493|AC-8
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003712 transcription coregulator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0008270 zinc ion binding; GO:0009416 response to light stimulus; GO:0009640...
KEGG
KO: K12135 | Pathway: 04712 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa01g2182Pa01g2182.1

…150 | GO:0008270 | GO:0031981 | GO:0042790 | fibrillar center | DNA binding | DNA-binding transcription factor activity | DNA-directed RNA polymerase activity | protein binding | nucleus | nucleoplasm | nucleolus | RNA polymerase I complex | nucleobase-containing compound metabolic process | DNA-tem…

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eggNOG
Preferred name: LOC108990522 | Seed ortholog: 337451.A0A3S3MPJ9 | eggNOG OG: TFIIS_C@131567|d-5
GO
GO:0001650 fibrillar center; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005736 RNA polymerase I complex; GO:0006139 nucleobase-containing compound metabolic process; GO:0006354 DNA-templated transcription elongation; GO:0006355...
KEGG
KO: K03000 | Pathway: 03020 | BRITE: 00001, 01611, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa01g2189Pa01g2189.1

…ing | ATP-dependent topological DNA co-entrapment activity | lncRNA binding | DNA-binding transcription factor binding

Show annotation evidence
eggNOG
Preferred name: SYN2 | Seed ortholog: 4432.A0A1U7Z8W5 | COG: S | eggNOG OG: Rad21_Rec8@131567|AQ-7, Rad21_Rec8@33090|Vq-22, Rad21_Rec8_N@131567|A-1*, Rad21_Rec8_N@2759|Ae-8, Rad21_Rec8_N@33090|NV-16, Rad21_Rec8_N@3398|SD-18
GO
GO:0000278 mitotic cell cycle; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006302 double-strand break repair; GO:0019901 protein kinase binding; GO:0043565 sequence-specific DNA binding; GO:0061776 ATP-dependent...
KEGG
KO: K06670 | Pathway: 04110, 04111, 04113 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa01g2207Pa01g2207.1

…O:0006355 | GO:0042803 | GO:0045892 | GO:0050777 | GO:0071219 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | protein homodimerization activity | negative regulation of DNA-templated transcription | negative regulati…

Show annotation evidence
eggNOG
Preferred name: LOC104592755 | Seed ortholog: 337451.A0A443NNV1 | COG: S | eggNOG OG: Myb_DNA-bind_4@131567|v-6, Myb_DNA-bind_4@2759|AN-7, Myb_DNA-bind_4@3193|sL-18, Myb_DNA-bind_4@3398|AbS-21, Myb_DNA-bind_4@35493|NK-14
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042803 protein homodimerization activity; GO:0045892 negative regulation of DNA-templated transcription; GO:0050777 negative regulation of immune response; GO:0071219 cellular response to molecule of bacterial origin
KEGG
EC: ec:2.7.7.1, ec:2.7.7.18 | KO: K06210 | Pathway: 00760, 01100, 01240 | Module: M00115, M00912 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
Pa01g2329Pa01g2329.1

…O:0006355 | GO:0007623 | GO:0010031 | GO:0010468 | GO:0010629 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | DNA-templated transcription | regulation of DNA-templated transcription | circadian rhythm | circumnutation | regulation of gene expression | negative…

Show annotation evidence
eggNOG
Preferred name: APRR1, LOC110799679 | Seed ortholog: 337451.A0A3S4NQ62, 56857.A0A200QEU3 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@1462614|QS-15, CCT@2759|H-4, CCT@33090|BC-8, Response_reg|16CZRA@1462614, Response_reg|16CZRA@33090, Response_reg|16CZRA@58023
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0010031 circumnutation; GO:0010468 regulation of gene expression; GO:0010629 negative regulation of gene expression
KEGG
KO: K12127 | Pathway: 04712 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa01g2362Pa01g2362.1

Pa01g2362 | Pa01g2362.1 | Pa01g2362.2 | Pa01g2362.3 | Pa01g2362.4 | Pa01g2362.5 | R1A-6_16 | TOM20 | 337451.A0A3S4Q232 | 337451.A0A443N7B7 | TOM20_plant@131567|B-2 | zf-CCHC@131567|Em-12 | zf-CCHC@2759|np-19 | zf-GRF@131567|a-5 | S | ec:3.1.11.2 | ec:3.1.4...

Show annotation evidence
eggNOG
Preferred name: R1A-6_16, TOM20 | Seed ortholog: 337451.A0A3S4Q232, 337451.A0A443N7B7 | COG: S | eggNOG OG: TOM20_plant@131567|B-2, zf-CCHC@131567|Em-12, zf-CCHC@2759|np-19, zf-GRF@131567|a-5
GO
GO:0000012 single strand break repair; GO:0000278 mitotic cell cycle; GO:0000325 plant-type vacuole; GO:0000405 bubble DNA binding; GO:0000712 resolution of meiotic recombination intermediates; GO:0000724 double-strand break repair via homologous recombination; GO:0000725 recombinational repair; GO:0001650 fibrillar center; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003684 damaged DNA binding; GO...
KEGG
EC: ec:3.1.11.2, ec:3.1.4.1, ec:4.2.99.18, ec:5.6.2.1, ec:5.6.2.3, ec:5.6.2.5, ec:7.2.2.8 | KO: K01142, K03165, K09276, K10569, K10706, K10772, K11292, K13187, K14440, K15173, K15363, K17491, K17686, K18417, K25177 | Pathway: 03410, 03440, 03460, 04918 | BRITE: 00001, 01000, 01009, 03000, 03009, 03019, 03021, 03032, 03036, 03041, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa01g2380Pa01g2380.1

…37 | GO:0009408 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | response to heat

Show annotation evidence
eggNOG
Preferred name: LOC107922949 | Seed ortholog: 3641.A0A061DRG4 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@1437183|BrS-29, HSF_DNA-bind@3193|AWe-23, HSF_DNA-bind@33090|fZ-18, HSF_DNA-bind@3398|AtY-25, HSF_DNA-bind@35493|uY-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009408 response to heat
KEGG
EC: ec:1.13.11.53, ec:1.13.11.54 | KO: K09419 | Pathway: 00270, 01100 | Module: M00034 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g2404Pa01g2404.1

…GO:0043565 | GO:0045454 | GO:0048364 | GO:0048366 | GO:0051457 | GO:0090610 | DNA-binding transcription factor activity | protein binding | nucleus | asymmetric cell division | gravitropism | radial pattern formation | sequence-specific DNA binding | cell redox homeostasis | root development | leaf …

Show annotation evidence
eggNOG
Preferred name: SCR_2 | Seed ortholog: 337451.A0A3S3NGC7 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|NC-17, GRAS@3398|WW-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008356 asymmetric cell division; GO:0009630 gravitropism; GO:0009956 radial pattern formation; GO:0043565 sequence-specific DNA binding; GO:0045454 cell redox homeostasis; GO:0048364 root development; GO:0048366 leaf development; GO:0051457 maintenance of protein location in nucleus; GO:0090610 bundle sheath...
KEGG
KO: K27742 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g2405Pa01g2405.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104592198 | Seed ortholog: 337451.A0A3S3N7X7 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@3398|Dli-32, NB-ARC@35493|Ary-24, NB-ARC@58023|BfR-27
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13457 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa01g2475Pa01g2475.1

…72 | GO:0080060 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | determination of bilateral symmetry | embryonic pattern specification | adaxial/abaxial axis specification | polarity specification of adaxial/abaxial…

Show annotation evidence
eggNOG
Preferred name: HOX32 | Seed ortholog: 337451.A0A3S3MLF5 | COG: S | eggNOG OG: Homeodomain@131567|HP-13, Homeodomain@35493|CNy-26, START@131567|e-5, START@2759|CL-9, START@3398|Mr-14, START@35493|JK-13
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009855 determination of bilateral symmetry; GO:0009880 embryonic pattern specification; GO:0009943 adaxial/abaxial axis specification; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009955 adaxial/abaxial pattern...
KEGG
KO: K09338 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g2490Pa01g2490.1

…n sequence-specific DNA binding | DNA binding | single-stranded DNA binding | DNA-binding transcription factor activity | transcription corepressor activity | RNA binding | mRNA binding | extracellular region | nucleus | mitochondrion | DNA repair | defense response | chloroplast | chloroplast strom…

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eggNOG
Preferred name: WHY1 | Seed ortholog: 337451.A0A3S3MAW2 | COG: S | eggNOG OG: Whirly@131567|A-1, Whirly@2759|e-6
GO
GO:0000781 chromosome, telomeric region; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003697 single-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003714 transcription corepressor activity; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006281 DNA...
KEGG
KO: K26559, K26560 | BRITE: 00001, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa01g2511Pa01g2511.1

…08 | GO:0042802 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | response to heat | identical protein binding

Show annotation evidence
eggNOG
Preferred name: LOC104598667 | Seed ortholog: 56857.A0A200Q4S4 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@1437183|BrS-29, HSF_DNA-bind@3193|AWe-23, HSF_DNA-bind@33090|fZ-18, HSF_DNA-bind@3398|AtY-25, HSF_DNA-bind@35493|uY-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009408 response to heat; GO:0042802 identical protein binding
KEGG
EC: ec:1.13.11.53, ec:1.13.11.54 | KO: K09419 | Pathway: 00270, 01100 | Module: M00034 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g2543Pa01g2543.1

…vity | minor groove of adenine-thymine-rich DNA binding | chromatin binding | DNA-binding transcription factor activity | transcription elongation factor activity | transcription coactivator activity | transcription corepressor activity | RNA binding | helicase activity | histone acetyltransferase a…

Show annotation evidence
eggNOG
Preferred name: IDM1 | Seed ortholog: 337451.A0A443NP02 | COG: S | eggNOG OG: PHD@131567|A-1*, PHD@2759|B-2!, TDBD@131567|A-1*, TDBD@2759|Ai-9, TDBD@3193|ER-13, TDBD@33090|BM-10
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000118 histone deacetylase complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000123 histone acetyltransferase complex; GO:0000183 rDNA heterochromatin formation; GO:0000212 meiotic spindle organization; GO:0000228 nuclear chromosome; GO:0000278 mitotic cell cycle; GO:0000381 regulation of alternative mRNA splicing, via...
KEGG
EC: ec:1.14.11.27, ec:1.14.11.65, ec:1.14.11.67, ec:2.1.1.354, ec:2.1.1.357, ec:2.1.1.369, ec:2.1.1.370, ec:2.1.1.371, ec:2.3.1.48, ec:2.3.2.27, ec:2.7.11.22, ec:2.7.11.23, ec:2.7.4.14, ec:2.8.3.13, ec:3.1.3.16, ec:5.6.2.6, ec:6.1.1.6 | KO: K02603, K02606, K04498, K04567, K06062, K06101, K06672, K07117, K08819, K08881, K08882, K08883, K09186, K09187, K09188, K09189, K10276, K10603, K10638, K10728, K10875, K10896,...
eggNOGGOKEGG
eggNOG-inferred
Pa01g2547Pa01g2547.1

…| WRKY@3398|tR-21 | S | WRKY_117_136 | GO:0003700 | GO:0005515 | GO:0005634 | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: WRKY43 | Seed ortholog: 337451.A0A3S4NQD6 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|VE-17, WRKY@3398|tR-21
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
eggNOGGO
eggNOG-inferred
Pa01g2576Pa01g2576.1

…032 | GO:1900033 | GO:2000039 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | mitochondrion | regulation of DNA-templated transcription | trichome branching | fruit development | negative regulation of DNA-templated transcriptio…

Show annotation evidence
eggNOG
Preferred name: TRY | Seed ortholog: 337451.A0A3S3NI97 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@1437183|FZt-38, Myb_DNA-binding@35493|Ajp-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0010091 trichome branching; GO:0010154 fruit development; GO:0045892 negative regulation of DNA-templated transcription; GO:0048629 trichome patterning; GO:0080147 root hair...
KEGG
KO: K09422 | Pathway: 03040, 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g2580Pa01g2580.1

…457 | GO:2000022 | GO:2000070 | transcription cis-regulatory region binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus …

Show annotation evidence
eggNOG
Preferred name: WRKY41 | Seed ortholog: 337451.A0A443NNY1 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Z-5, WRKY@3398|PE-16
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated...
eggNOGGO
eggNOG-inferred
Pa01g2585Pa01g2585.1

…457 | GO:2000022 | GO:2000070 | transcription cis-regulatory region binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus …

Show annotation evidence
eggNOG
Preferred name: WRKY41 | Seed ortholog: 337451.A0A443NNY1 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Z-5, WRKY@3398|PE-16
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated...
eggNOGGO
eggNOG-inferred

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